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A
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B
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C
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D
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E
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F
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G
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I
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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V
A
A adsorption
Accelerating kinetic Monte Carlo
Adsorbate-adsorbate interactions
alpha (base.events.EventBase attribute)
(NeighborKMC.base.events.EventBase attribute)
Assumptions
atoms (base.system.SystemBase attribute)
(NeighborKMC.base.system.SystemBase attribute)
B
base
module
base.events
module
base.sites
module
base.system
module
C
Calculating Turnover Frequencies
Cite
CO oxidation
Code output
Code overview
covered (base.sites.SiteBase attribute)
(NeighborKMC.base.sites.SiteBase attribute)
(NeighborKMC.examples.Pt_111_COOx.user_sites.Site attribute)
(NeighborKMC.tutorials.A_ads.user_sites.Site attribute)
(NeighborKMC.tutorials.B2_ads.user_sites.Site attribute)
D
diffev (base.events.EventBase attribute)
(NeighborKMC.base.events.EventBase attribute)
do_event() (base.events.EventBase method)
(NeighborKMC.base.events.EventBase method)
E
EventBase (class in base.events)
(class in NeighborKMC.base.events)
F
find_nn_recurse() (base.system.SystemBase method)
(NeighborKMC.base.system.SystemBase method)
G
get_coverages() (base.system.SystemBase method)
(NeighborKMC.base.system.SystemBase method)
get_involve_other() (base.events.EventBase method)
(NeighborKMC.base.events.EventBase method)
get_ncovs() (base.system.SystemBase method)
(NeighborKMC.base.system.SystemBase method)
get_rate() (base.events.EventBase method)
(NeighborKMC.base.events.EventBase method)
Glossary
I
ind (base.sites.SiteBase attribute)
(NeighborKMC.base.sites.SiteBase attribute)
(NeighborKMC.examples.Pt_111_COOx.user_sites.Site attribute)
(NeighborKMC.tutorials.A_ads.user_sites.Site attribute)
(NeighborKMC.tutorials.B2_ads.user_sites.Site attribute)
Installation
K
kMC
L
lattice_pos (base.sites.SiteBase attribute)
(NeighborKMC.base.sites.SiteBase attribute)
Literature
M
module
base
base.events
base.sites
base.system
NeighborKMC.base
NeighborKMC.base.events
NeighborKMC.base.sites
NeighborKMC.base.system
NeighborKMC.examples.Pt_111_COOx.user_sites
NeighborKMC.tutorials.A_ads.user_sites
NeighborKMC.tutorials.B2_ads.user_sites
N
NeighborKMC.base
module
NeighborKMC.base.events
module
NeighborKMC.base.sites
module
NeighborKMC.base.system
module
NeighborKMC.examples.Pt_111_COOx.user_sites
module
NeighborKMC.tutorials.A_ads.user_sites
module
NeighborKMC.tutorials.B2_ads.user_sites
module
O
Options
P
Parallelisation
params (base.events.EventBase attribute)
(NeighborKMC.base.events.EventBase attribute)
possible() (base.events.EventBase method)
(NeighborKMC.base.events.EventBase method)
Q
Quick start
R
Restarting MonteCoffee
S
Site (class in NeighborKMC.examples.Pt_111_COOx.user_sites)
(class in NeighborKMC.tutorials.A_ads.user_sites)
(class in NeighborKMC.tutorials.B2_ads.user_sites)
SiteBase (class in base.sites)
(class in NeighborKMC.base.sites)
sites (base.system.SystemBase attribute)
(NeighborKMC.base.system.SystemBase attribute)
Special sites
Structure
stype (base.sites.SiteBase attribute)
(NeighborKMC.base.sites.SiteBase attribute)
(NeighborKMC.examples.Pt_111_COOx.user_sites.Site attribute)
(NeighborKMC.tutorials.A_ads.user_sites.Site attribute)
(NeighborKMC.tutorials.B2_ads.user_sites.Site attribute)
SystemBase (class in base.system)
(class in NeighborKMC.base.system)
V
verify_nlist() (base.system.SystemBase method)
(NeighborKMC.base.system.SystemBase method)
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